formetascore

Questions about GenABEL (aka *ABEL) suite of packages
Forum rules
Please remember not to post any sensitive data on this public forum.
The first few posts of newly registered users will be moderated in order to filter out any spammers.

When get a solution to the problem you posted, please change the topic name (e.g. from "how to ..." to "[SOLVED] how to ..."). This will make it easier for the community to follow the posts yet to be attended.
lkadalayil
Posts: 4
Joined: Fri Feb 06, 2015 1:24 pm

formetascore

Postby lkadalayil » Fri Feb 06, 2015 2:01 pm

I am a new comer to GWAs. I would like to run formetascore on a test dataset 'data' on 1 SNP. I will do meta-analysis with the outputs from formetascore on the same SNP from another study. I ran this

x<- formetascore(GASurv(fuptime, phenotype),data)

I got this

Error in .subset2(x, i, exact = exact) : no such index at level 1

Obviously I am not doing this right. Is my syntax correct? What is the formula for survival data? Any help appreciated.
Latha

Return to “GenABEL”

Who is online

Users browsing this forum: No registered users and 1 guest