Imputation output filter queation

Questions about GenABEL (aka *ABEL) suite of packages
Forum rules
Please remember not to post any sensitive data on this public forum.
The first few posts of newly registered users will be moderated in order to filter out any spammers.

When get a solution to the problem you posted, please change the topic name (e.g. from "how to ..." to "[SOLVED] how to ..."). This will make it easier for the community to follow the posts yet to be attended.
shirleydaidai
Posts: 4
Joined: Tue Feb 14, 2017 7:00 am

Imputation output filter queation

Postby shirleydaidai » Fri Feb 17, 2017 12:59 am

Hi,
I used "impute2databel" function, to generate *.fvi and *.fdv files from impute2 output.

Code: Select all

impute2databel("chr22.impute2", "chr22.phased.sample","out", makeprob=TRUE, old=FALSE)

I wonder if GenABEL package has a function to filter info file or gen file by r2.
Thanks

Return to “GenABEL”

Who is online

Users browsing this forum: No registered users and 2 guests