[SOLVED] mach2databel - Error in dimnames..

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lckarssen
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Joined: Tue Jan 04, 2011 3:04 pm
Location: Utrecht, The Netherlands

Re: mach2databel - Error in dimnames..

Postby lckarssen » Thu Feb 09, 2017 8:42 pm

Thanks for joining the forum. I will try and see if I can reproduce this. I happen to have to convert some imputed data in VCF format to DatABEL files myself. I will get back to you in a couple of days.
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Lennart Karssen
PolyOmica
The Netherlands
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sigridbo
Posts: 1
Joined: Wed Feb 08, 2017 12:45 pm

Re: mach2databel - Error in dimnames..

Postby sigridbo » Mon Feb 13, 2017 10:29 am

Thank you very much!

Another think I could mention is that the .dose-file was on the format:

Code: Select all

9455456984_RO6C01->9455456984_RO6C01 MLDOSE 0.745 0.001 0.864   ...etc.
9455458937_RO1CO2->9455458937_RO1CO2 MLDOSE 0.869 0.001 0.866 ...etc.
9456874354_RO5CO1->9456874354_RO5CO1 MLDOSE 0.912 0.001 0.853 ...etc.
etc.


after conversion with DosageConvertor, but since I got the this dimname-error, I tried to change the first part (before the ->) to 1, 2, 3 etc. to match the mldose example file. However none of them worked..
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