Genomic control for ProbABEL Cox regression

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a.grotenhuis
GenABEL suite user
GenABEL suite user
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Joined: Wed Dec 21, 2011 9:42 am

Genomic control for ProbABEL Cox regression

Postby a.grotenhuis » Wed Jul 09, 2014 6:27 am

Can anyone possibly advise me in what are the possibilities for genomic control correction in genome-wide Cox regression using ProbABEL? Is there a function within ProbABEL to calculate lambda and to apply genomic control as part of the analysis? Or is correction usually done after the GWAS run? Which software can be used for this?

Thanks.

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