Regression analysis on a subset of IDs

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afsa
Posts: 2
Joined: Wed Aug 03, 2016 9:21 am

Regression analysis on a subset of IDs

Postby afsa » Wed Aug 03, 2016 9:25 am

Hello,

Is there a way to run 'palogist' on a subset of IDs using the 'nids' option? Or any other way that does not involve creating new files?

How does exactly can we use the option 'nids'?

Thanks.
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lckarssen
Site Admin
Site Admin
Posts: 322
Joined: Tue Jan 04, 2011 3:04 pm
Location: Utrecht, The Netherlands

Re: Regression analysis on a subset of IDs

Postby lckarssen » Wed Aug 03, 2016 10:06 am

The --nids option is a bit weird. I never really understood its use. When the option is set (e.g. to a number n), only the first n individuals will be used.

So, apart from only using the first n individuals there is no way to select a subset of individuals.

I have added this as an issue in our bug tracker: https://github.com/GenABEL-Project/ProbABEL/issues/30
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Lennart Karssen
PolyOmica
The Netherlands
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afsa
Posts: 2
Joined: Wed Aug 03, 2016 9:21 am

Re: Regression analysis on a subset of IDs

Postby afsa » Thu Aug 04, 2016 6:19 am

Thanks
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