Regression analysis on a subset of IDs

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afsa
Posts: 2
Joined: Wed Aug 03, 2016 9:21 am

Regression analysis on a subset of IDs

Postby afsa » Wed Aug 03, 2016 9:25 am

Hello,

Is there a way to run 'palogist' on a subset of IDs using the 'nids' option? Or any other way that does not involve creating new files?

How does exactly can we use the option 'nids'?

Thanks.

lckarssen
Site Admin
Site Admin
Posts: 321
Joined: Tue Jan 04, 2011 3:04 pm
Location: Utrecht, The Netherlands

Re: Regression analysis on a subset of IDs

Postby lckarssen » Wed Aug 03, 2016 10:06 am

The --nids option is a bit weird. I never really understood its use. When the option is set (e.g. to a number n), only the first n individuals will be used.

So, apart from only using the first n individuals there is no way to select a subset of individuals.

I have added this as an issue in our bug tracker: https://github.com/GenABEL-Project/ProbABEL/issues/30
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Lennart Karssen
PolyOmica
The Netherlands
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afsa
Posts: 2
Joined: Wed Aug 03, 2016 9:21 am

Re: Regression analysis on a subset of IDs

Postby afsa » Thu Aug 04, 2016 6:19 am

Thanks


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